PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01002207G0260 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 414aa MW: 45147.5 Da PI: 9.3708 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.6e-10 | 49 | 91 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr+++NReAAr+sR+RKka++++Le +L + ++L+ PH01002207G0260 49 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 91 5899*************************86666666555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 46 | 93 | No hit | No description |
SMART | SM00338 | 4.0E-8 | 46 | 109 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.289 | 48 | 92 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-7 | 50 | 91 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 5.95E-23 | 50 | 102 | No hit | No description |
SuperFamily | SSF57959 | 4.5E-7 | 51 | 93 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 53 | 68 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.6E-33 | 132 | 207 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence Send to blast |
MADASSRTDT STVVDTDDKN QRLENGQSGA IMPSNSSDRS DRSDKPMDQK VLRRLAQNRE 60 AARKSRLRKK AYVQQLESSK LKLASLEQEL QKARQQGIFI SSSGEQTHAM SGNGAMTFDL 120 EYARWLEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEIFKLKGIA AKADVFHMLS 180 GMWKTPAERC FLWIGGFRSS ELLKLLANQL EPLTEQQLLG LSNLQQSSQQ AEDALSQGME 240 ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL ENFLRQKIGG SVPSGQVILT 300 SSGIILYFDA VQVGNKGTGR METISKTYCG RTNWEIGKGF KCPTCDFFCI SGPVVIFNFK 360 NSSAIICKID ICTVLLLRVP KVAGDLPRPR TLQGPALVPR RGGSPTPYVG RGR* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01002207G0260 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX424317 | 0.0 | JX424317.1 Triticum monococcum TGA-type basic leucine zipper protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003558037.1 | 0.0 | transcription factor TGA2.2 isoform X1 | ||||
Swissprot | Q6IVC3 | 1e-178 | TGA22_ORYSJ; Transcription factor TGA2.2 | ||||
TrEMBL | I1H628 | 0.0 | I1H628_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G64060.1 | 0.0 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-111 | bZIP family protein |
Publications ? help Back to Top | |||
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