PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01002051G0290
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family GeBP
Protein Properties Length: 296aa    MW: 33380.9 Da    PI: 9.9563
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01002051G0290genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57330.11.3e-0993176397
           DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                      ++r ws +De+ +L +l + ++  +       +afy+ + + ++ k   +++l +K+r+L+++f ++ ++      ++ s +hd+  ++ls+ +
  PH01002051G0290  93 SRRTWSADDEVRILEALSERQSPPD-------KAFYNSLLGLLDDKsCDRRELEDKVRSLRRRFFNDTRR-----GVVPSGDHDRRLYDLSNAV 174
                      5799************987744444.......68999999999765267899***************999.....5677899************ PP

           DUF573  96 Wg 97 
                      Wg
  PH01002051G0290 175 WG 176
                      *8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.2E-1394176IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MAPKRRARPS RSKDSVEIGP NGVLVVEQEP AKKPSPPPPQ EEEVDEVDGR DALLLLCRSP  60
QPKRTKPSPQ PARSSRPKGD GPAREATKPP LPSRRTWSAD DEVRILEALS ERQSPPDKAF  120
YNSLLGLLDD KSCDRRELED KVRSLRRRFF NDTRRGVVPS GDHDRRLYDL SNAVWGYMPT  180
NAGAANQVEN GDNMQAESSE QALPNAGTSL EEIHKRYPYL AQEVMRLEPA QREMFNMALL  240
RMDGGKARAL DARIKKFRLA KLKLDWQLGK RAKRLMADYS SIMDELTKTT IELLQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01002051G0290
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP139691113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.13e-07DNA-binding storekeeper protein-related transcriptional regulator