PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01001986G0070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 184aa MW: 20016.5 Da PI: 8.9479 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.5 | 4e-15 | 87 | 135 | 3 | 51 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +++r++r+++NRe+A rsR+RK+a++eeLe+++ L eN +Lkk+ +e PH01001986G0070 87 DDRRTIRMMRNRESALRSRARKRAYVEELEKEARRLVDENLKLKKQCKE 135 589*************************************999987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.2E-12 | 85 | 163 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.553 | 87 | 132 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-12 | 88 | 136 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.19E-16 | 89 | 135 | No hit | No description |
SuperFamily | SSF57959 | 4.81E-11 | 89 | 135 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.9E-13 | 89 | 135 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MANYHHYQMA VHSAAAAAAA AWREPDSPQL SIMSGCSSLF SISTLRDDDD GAVVLAGHAL 60 PATPVSLAGF AGDEVEMDVR QSGGSGDDRR TIRMMRNRES ALRSRARKRA YVEELEKEAR 120 RLVDENLKLK KQCKESTCSH WTAETGSGCT SPAYQELTAT NLINSILKGQ RSRRVFGSTK 180 LRG* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01001986G0070 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT033858 | 2e-95 | BT033858.1 Zea mays full-length cDNA clone ZM_BFc0165B20 mRNA, complete cds. | |||
GenBank | JX469961 | 2e-95 | JX469961.1 Zea mays subsp. mays clone UT3223 bZIP-type transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025812603.1 | 3e-79 | bZIP transcription factor 46-like | ||||
TrEMBL | A0A2S3HG73 | 7e-78 | A0A2S3HG73_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7DU08 | 7e-78 | A0A2T7DU08_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A3L6PES2 | 7e-78 | A0A3L6PES2_PANMI; Protein FD-like | ||||
STRING | Si007412m | 1e-75 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 4e-11 | bZIP family protein |