PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001527G0270
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 492aa    MW: 52198.5 Da    PI: 5.3512
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001527G0270genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.56.9e-14280332456
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                       k+ +rkq+NRe+ArrsR RK a ++ Lee v +L  eN++L  +l   ++++
  PH01001527G0270 280 EKVKKRKQSNRESARRSRSRKAAHLKDLEEQVSQLGVENSSLLRRLADASQKY 332
                      6999************************************9997776655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-16277341IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-11277354No hitNo description
PROSITE profilePS5021710.944279333IPR004827Basic-leucine zipper domain
PfamPF001705.1E-11280328IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-9281329No hitNo description
PfamPF124982.9E-34348467IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MKRVFSMEEI PDPFWAPPPP PLQPQMIAGG IGGVGGLGSG VGSGGGGGAT VGAMNRRPWG  60
WYFQKFLEET LLDDPTPPAA ANPSASVLYP NPMADASERR GYCDEVVEVI PVPAPTPAPA  120
AAASTVVDPV EYSAMLKRKL DVDLAAVAMW RGWKRDEPAR LIPTQASGTM HPAGSLGNRA  180
LPNSCGSNLG SQNYSGDVVF LWLTPDVPFS YLGSYPSNGI LVQNKLGGGP SGGSDPYLVQ  240
NANARVKQAT SSSSREPSPS NDHVMEGETD RMGNMNLTEE KVKKRKQSNR ESARRSRSRK  300
AAHLKDLEEQ VSQLGVENSS LLRRLADASQ KYNDAAVDNR VLKADVETLK TKVKMAEETV  360
KRVAGTSQLP QAISGMSSLS IPISGSPSDA TSDASVPIQD NPITYFATAT DARVNNSYMP  420
EIDPTFRIED MINGALTTGA PTSSMDQTAS QGVTNLGHLQ RRVYGAPTSS GSAPWGSALL  480
DPNEPVNMEM Q*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001527G0270
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004981429.11e-107bZIP transcription factor RISBZ2 isoform X1
RefseqXP_022679227.11e-107bZIP transcription factor RISBZ2 isoform X2
TrEMBLA0A0A9DSQ71e-115A0A0A9DSQ7_ARUDO; Ohp1
STRINGLPERR03G31620.11e-108(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.17e-23bZIP family protein