PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001329G0010
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family G2-like
Protein Properties Length: 347aa    MW: 37811.3 Da    PI: 6.9715
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001329G0010genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.67.5e-30148204155
          G2-like   1 kprlrWtpeLHerFveaveqLGG..sekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r+rW+ eLH+rF++av+qLGG  s++AtPk+il lmkvkgLt++hvkSHLQkYR+
  PH01001329G0010 148 KARMRWNLELHDRFIDAVNQLGGsgSDNATPKAILGLMKVKGLTRDHVKSHLQKYRS 204
                      68********************73369*****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.509145207IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-27146205IPR009057Homeodomain-like
SuperFamilySSF466891.45E-15146205IPR009057Homeodomain-like
TIGRFAMsTIGR015579.8E-23148205IPR006447Myb domain, plants
PfamPF002491.6E-8150203IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MATSSSHLSS VLAHGQHSNL TPSIAHSLNA GTLSSGLISY PGVPAQATRC ADPLGGVQTR  60
NVSDSVQRRG PNEFDDSDEW IENLDDIIAN DVTADFLQMA GSAPVPSSLN SEEFQPIIHQ  120
SVPSNSRQLR PTISPPSTTN VHSPKRTKAR MRWNLELHDR FIDAVNQLGG SGSDNATPKA  180
ILGLMKVKGL TRDHVKSHLQ KYRSSQVAQV KHHSSEGTSV ETTMPTEVVP SCVQISIEEF  240
ALRTRMEVQK KLHEMVDKTR RDLMEIHTRM FEKHLMDLQE FEKRRTLSMD RMSRLSSPAA  300
ALASASAAFP EDRSNINAKL DADGHVSSTV ELQRIAEAGS HGDAGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-17148206157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-17148206157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-17148206157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-17148206157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-17148206258Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001329G0010
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825635.11e-102protein PHOSPHATE STARVATION RESPONSE 2-like isoform X1
TrEMBLA0A2T7CXB81e-100A0A2T7CXB8_9POAL; Uncharacterized protein
TrEMBLA0A2T8ID141e-100A0A2T8ID14_9POAL; Uncharacterized protein
STRINGPavir.J07757.1.p2e-82(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16835911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.12e-25phosphate starvation response 1