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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PH01001002G0190 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
GATA |
| Protein Properties |
Length: 277aa MW: 29425.3 Da PI: 9.0327 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01001002G0190 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 25.7 | 1.6e-08 | 141 | 160 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20
Cs C+ttkTplWR+gp g+k
PH01001002G0190 141 CSDCNTTKTPLWRSGPCGPK 160
****************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MDPPILFPFV INNSSPSDSS LIYGSDHHLR QHQAILEPQH MIGGSSSVFA TPFPTVESIH 60
DDMIERSSYD PYDMEKLQVT SGSVKTGKWT APAAAKMRIT RKTSDSGVGG AAKKPRRRAQ 120
AYEDHNHSSM MNQPLGVIRV CSDCNTTKTP LWRSGPCGPK AAEGAAGDDG LRGGAKVGTP 180
SDAATAHPKV KKEKRADVDR SLPFKKRCKL VVQDHTATTA AAADDKAIAK SAEVVNWGKS 240
SAAAAACFRS SAFAVQDEIT DAAMLLMTLS CGLVRS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
