PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000985G0130 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | NAC | ||||||||
Protein Properties | Length: 358aa MW: 39871.5 Da PI: 5.0858 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50 | 9.7e-16 | 55 | 182 | 8 | 128 |
NAM 8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyat..gkrknratk....sgyWkatgk 88 hP+d+el++ +L +k++gk++++ +i+++diy++ P +L + + + +++ewyfF++ + +++ g+r+ r++ +++W+ PH01000985G0130 55 HPKDHELITGFLVPKLDGKQFDA-GFIHDADIYTAAPDKLVAqympapgSGNDNDREWYFFCPVRYVNEKrpGRRRWRTVPaegaKARWHPERG 147 9**********************.99**************7335666654444788******99776654224455553224344778999999 PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v g lk + v + ++ + + W+m ey l PH01000985G0130 148 PQTVEG--G--YLLKLSYVVVT-KEGEKIRQGWCMVEYGL 182 888866..3..34444444443.44445789*******76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.629 | 48 | 200 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.71E-25 | 54 | 200 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-9 | 54 | 181 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MPMVQVLWFL LLPCSLPLCS LSPLASVIGL DGILMTGLAM DELMLLVRGT SIPIHPKDHE 60 LITGFLVPKL DGKQFDAGFI HDADIYTAAP DKLVAQYMPA PGSGNDNDRE WYFFCPVRYV 120 NEKRPGRRRW RTVPAEGAKA RWHPERGPQT VEGGYLLKLS YVVVTKEGEK IRQGWCMVEY 180 GLDHHHRPRG NLVLCKLYRS PRAPLSESEA SATSTEAVSG SGCKRKATDD HPDARVRPSV 240 RWQWGKDDEL ILMLRERELC SECRSRLPGG EPSEREPRRS PHGEVDGIEN FLMTDDPALG 300 PDDDSAVLKY FGGDLQLQEL LKGQPPCAPR AEPEEDGLME TVLAWCMEGD EGVQIDA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000985G0130 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4363 | 21 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 3e-10 | NAC domain containing protein 35 |