PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000985G0130
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family NAC
Protein Properties Length: 358aa    MW: 39871.5 Da    PI: 5.0858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000985G0130genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM509.7e-16551828128
              NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyat..gkrknratk....sgyWkatgk 88 
                      hP+d+el++ +L +k++gk++++  +i+++diy++ P +L +       + + +++ewyfF++ +  +++  g+r+ r++     +++W+    
  PH01000985G0130  55 HPKDHELITGFLVPKLDGKQFDA-GFIHDADIYTAAPDKLVAqympapgSGNDNDREWYFFCPVRYVNEKrpGRRRWRTVPaegaKARWHPERG 147
                      9**********************.99**************7335666654444788******99776654224455553224344778999999 PP

              NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++v    g    lk + v  + ++ +  +  W+m ey l
  PH01000985G0130 148 PQTVEG--G--YLLKLSYVVVT-KEGEKIRQGWCMVEYGL 182
                      888866..3..34444444443.44445789*******76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.62948200IPR003441NAC domain
SuperFamilySSF1019414.71E-2554200IPR003441NAC domain
PfamPF023658.7E-954181IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MPMVQVLWFL LLPCSLPLCS LSPLASVIGL DGILMTGLAM DELMLLVRGT SIPIHPKDHE  60
LITGFLVPKL DGKQFDAGFI HDADIYTAAP DKLVAQYMPA PGSGNDNDRE WYFFCPVRYV  120
NEKRPGRRRW RTVPAEGAKA RWHPERGPQT VEGGYLLKLS YVVVTKEGEK IRQGWCMVEY  180
GLDHHHRPRG NLVLCKLYRS PRAPLSESEA SATSTEAVSG SGCKRKATDD HPDARVRPSV  240
RWQWGKDDEL ILMLRERELC SECRSRLPGG EPSEREPRRS PHGEVDGIEN FLMTDDPALG  300
PDDDSAVLKY FGGDLQLQEL LKGQPPCAPR AEPEEDGLME TVLAWCMEGD EGVQIDA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000985G0130
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.13e-10NAC domain containing protein 35