PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000728G0010
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family NAC
Protein Properties Length: 418aa    MW: 45870.1 Da    PI: 7.3265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000728G0010genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.93.8e-10955349
              NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k 49
                      ++ FhP+d el++ +L++k++g+++++   i++vd+y++ P +L+ +
  PH01000728G0010  9 TCLAFHPQDRELIDLFLRPKLAGQPFHA-GLIHDVDVYSAAPDKLKlN 55
                     5678**********************99.89**************832 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-10452IPR003441NAC domain
PfamPF057709.3E-88145347IPR008656Inositol-tetrakisphosphate 1-kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0032957Biological Processinositol trisphosphate metabolic process
GO:0005622Cellular Componentintracellular
GO:0000287Molecular Functionmagnesium ion binding
GO:0003677Molecular FunctionDNA binding
GO:0005524Molecular FunctionATP binding
GO:0047325Molecular Functioninositol tetrakisphosphate 1-kinase activity
GO:0052725Molecular Functioninositol-1,3,4-trisphosphate 6-kinase activity
GO:0052726Molecular Functioninositol-1,3,4-trisphosphate 5-kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MAQAAGLATC LAFHPQDREL IDLFLRPKLA GQPFHAGLIH DVDVYSAAPD KLKLNQHRML  60
LLIVIVVVAV EADTNAAYYV GARSWDLLET INYDVAAIVG VLKLCVGCLY LATDAVDRLI  120
LCLACNLKFA FLSRLSASHP SKTYRRKKGI LFVAIDQKRP LSDQGPFDVV LHKLTGKEWQ  180
RLLEEYRETH PEVTVLDPPG AIEHLLNRQS MLQEVSELDL SDCHGKVGVP KQLFVNTDPS  240
SIPAAVMRAG LSLPLVAKPL VAKSHELSLA YDPTSLTKLQ PPLVLQEFVN HGGVLFKVYI  300
VGDAIRVVRR FSLPNVDEGD LSNNAGVFRF PRVSCAAANA DDADLDPRVA GKLPYLGFSS  360
LTIIYVIHHW FWRTVLSTDA LTYSVRTSSE TIARDIGKRA APTTGTSDSC TCLFCMN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2odt_X4e-2614634633249Inositol-tetrakisphosphate 1-kinase
2q7d_A7e-2614634643259Inositol-tetrakisphosphate 1-kinase
2q7d_B7e-2614634643259Inositol-tetrakisphosphate 1-kinase
2qb5_A6e-2614634644260Inositol-tetrakisphosphate 1-kinase
2qb5_B6e-2614634644260Inositol-tetrakisphosphate 1-kinase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000728G0010
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0670680.0AK067068.1 Oryza sativa Japonica Group cDNA clone:J013093C21, full insert sequence.