PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000724G0330 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | NAC | ||||||||
Protein Properties | Length: 314aa MW: 34570.1 Da PI: 7.6092 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 148 | 4.7e-46 | 19 | 148 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdkevl 93 pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++Pw+Lp ++ +e+ewyfF++rd+k+a g r++r+t++g+Wkatg+d++v PH01000724G0330 19 PGFRFHPTEEELLEFYLKQVVHGKKLKF-DIIPTVHLYRHDPWELPGLARIGEREWYFFVPRDRKQAggcGGGRPSRTTERGFWKATGSDRSVR 111 9**************************9.99***************8778899*************9655578********************* PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++l+glkktLv+y+grap+g+ktdWvm+eyrl PH01000724G0330 112 CAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 148 98777788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 52.923 | 17 | 180 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.48E-52 | 18 | 180 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-24 | 19 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MDRRGAGGGG APELELELPG FRFHPTEEEL LEFYLKQVVH GKKLKFDIIP TVHLYRHDPW 60 ELPGLARIGE REWYFFVPRD RKQAGGCGGG RPSRTTERGF WKATGSDRSV RCAADPKRLI 120 GLKKTLVYYE GRAPRGTKTD WVMNEYRLPD ATCNAAAAGD SPTRNSQPKE GMVLCKIYRK 180 AVSLKELEQR VAMEELARST TPSASHNDTG SPVDSIASSD HEAAVHHDQQ LGVMPTEETL 240 MAGASAVVGR PSGGMKKEAA DDAAAAVVRP ATLSLPQLDG GGRLEWMQDP FLTQLRSPWM 300 ESWSPYYASV LNF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-43 | 13 | 180 | 10 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000724G0330 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002439057.1 | 1e-158 | NAC domain-containing protein 67 | ||||
Swissprot | Q10S65 | 1e-101 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A194YLW2 | 1e-156 | A0A194YLW2_SORBI; Uncharacterized protein | ||||
STRING | Sb10g030770.1 | 1e-157 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 4e-77 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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