PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000724G0330
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family NAC
Protein Properties Length: 314aa    MW: 34570.1 Da    PI: 7.6092
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000724G0330genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1484.7e-46191483128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdkevl 93 
                      pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++Pw+Lp  ++ +e+ewyfF++rd+k+a    g r++r+t++g+Wkatg+d++v 
  PH01000724G0330  19 PGFRFHPTEEELLEFYLKQVVHGKKLKF-DIIPTVHLYRHDPWELPGLARIGEREWYFFVPRDRKQAggcGGGRPSRTTERGFWKATGSDRSVR 111
                      9**************************9.99***************8778899*************9655578********************* PP

              NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  PH01000724G0330 112 CAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 148
                      98777788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.92317180IPR003441NAC domain
SuperFamilySSF1019412.48E-5218180IPR003441NAC domain
PfamPF023652.3E-2419148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MDRRGAGGGG APELELELPG FRFHPTEEEL LEFYLKQVVH GKKLKFDIIP TVHLYRHDPW  60
ELPGLARIGE REWYFFVPRD RKQAGGCGGG RPSRTTERGF WKATGSDRSV RCAADPKRLI  120
GLKKTLVYYE GRAPRGTKTD WVMNEYRLPD ATCNAAAAGD SPTRNSQPKE GMVLCKIYRK  180
AVSLKELEQR VAMEELARST TPSASHNDTG SPVDSIASSD HEAAVHHDQQ LGVMPTEETL  240
MAGASAVVGR PSGGMKKEAA DDAAAAVVRP ATLSLPQLDG GGRLEWMQDP FLTQLRSPWM  300
ESWSPYYASV LNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-431318010168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000724G0330
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002439057.11e-158NAC domain-containing protein 67
SwissprotQ10S651e-101NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A194YLW21e-156A0A194YLW2_SORBI; Uncharacterized protein
STRINGSb10g030770.11e-157(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.14e-77NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]