PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000568G0640
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 344aa    MW: 36801.9 Da    PI: 7.5658
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000568G0640genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.63.7e-20206268163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++e+krerrkq+NRe+A rsR+RK+ae+eeL++kv+ L+aeN++L+ e+++l++ ++kl+ e+
  PH01000568G0640 206 DRESKRERRKQSNRESACRSRLRKQAETEELATKVELLTAENTSLRCEISRLTESSKKLRLEN 268
                      589********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-141772IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.9E-16204265No hitNo description
SMARTSM003382.3E-19206270IPR004827Basic-leucine zipper domain
PfamPF001701.5E-18207268IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.633208271IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11210264No hitNo description
CDDcd147022.55E-18211259No hitNo description
PROSITE patternPS000360213228IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MNSTNGAVAY AFMPGPQDQP ALYPYLDWST MQAYYGLGIL PPTYFGPGIA PGRSPPPYIW  60
GPQMVNPLST EPAKSVSSKE NNLNKKLKEI DRTAVSTGSG NSEKTNGDYS VEGSSDGDNH  120
KASGTSKKRS LDDRPSSDDK KALDFSPGAE TGGASAPNHI PGEPGRLATL PNLRIPDTAI  180
KPNASTPSDF RVIGAPILTE LPAKDDRESK RERRKQSNRE SACRSRLRKQ AETEELATKV  240
ELLTAENTSL RCEISRLTES SKKLRLENSA LMEKLTDAAP DQAQEVSPAP DQTTAPPARA  300
VENFLSMIDN TNTSRSSGHT EHGAPKLRRL LGSGLATDAV AAS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000568G0640
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232100.11e-149G-box-binding factor 3 isoform X2
TrEMBLA0A0D9V3Q71e-156A0A0D9V3Q7_9ORYZ; Uncharacterized protein
STRINGLPERR01G21580.11e-156(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.14e-17G-box binding factor 2