PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000437G0190 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 346aa MW: 37209.6 Da PI: 9.6388 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.4 | 7.3e-14 | 259 | 311 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ ++L+ ++ ++v+k k PH01000437G0190 259 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELKEELQ---KKQVEMVEKQK 311 79*************************************998...44445555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.5E-14 | 255 | 320 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.588 | 257 | 302 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-14 | 259 | 310 | No hit | No description |
Pfam | PF00170 | 2.3E-11 | 259 | 304 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.79E-10 | 259 | 304 | No hit | No description |
CDD | cd14707 | 1.03E-23 | 259 | 311 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 262 | 277 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MDFPGGSGRQ QLPPMTPLPL ARQGSVYSLT FDEFQSTLGG AGKDFGSMNM DELLRNIWTA 60 EESHAIAASA ATTSSSAAVD HAAGAPIQRQ GSFTLPRTLS QKTVDDVWRD MMCFGAPSAA 120 APPPAQRQQT LGEVTLEEFL VRAGVVREDM AAGPPVPPVP VPAPAAQAPP PPPQPPVLFP 180 QSNVFAPMVP PLSLGNGLMT GAVGQGGSSA GTVRPVTFNE FGKMGRGDLP SLSSPPVPYV 240 FNGGLRGRKA SATEKVVERR QRRMIKNRES AARSRQRKQA YMMELEAEVA KLKELKEELQ 300 KKQVEMVEKQ KNEVIVTVSE KLLLLWTDST FAYLHVKEKQ NQAVP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000437G0190 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954029.1 | 1e-140 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 1e-137 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | K3YTM2 | 1e-140 | K3YTM2_SETIT; Uncharacterized protein | ||||
STRING | Si017618m | 1e-141 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.2 | 4e-39 | abscisic acid responsive element-binding factor 1 |