PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000383G0210
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family NAC
Protein Properties Length: 695aa    MW: 76916.5 Da    PI: 4.6828
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000383G0210genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.35.1e-5291421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      lp GfrFhPtdeel+++yLk k++g+  ++ evi+++d++k+ePwdLp k  +++++ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ +
  PH01000383G0210   9 LPLGFRFHPTDEELIQHYLKGKITGHIKSEVEVIPDIDVCKCEPWDLPdKsLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVI 102
                      699***********************988889***************96446677888************************************ PP

              NAM  93 lsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +sk    k++++g+kktLvf++grapkge+t W+mheyr+
  PH01000383G0210 103 KSKgekrKQHTIGMKKTLVFHRGRAPKGERTGWIMHEYRA 142
                      **987766677***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-583163IPR003441NAC domain
PROSITE profilePS5100556.7589163IPR003441NAC domain
PfamPF023651.8E-2710141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MTVMELKALP LGFRFHPTDE ELIQHYLKGK ITGHIKSEVE VIPDIDVCKC EPWDLPDKSL  60
IRSDDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGEKRK QHTIGMKKTL  120
VFHRGRAPKG ERTGWIMHEY RATEPEFEFG EQGGYVLYRL FRKQEEKNER SIPEEMDRSG  180
YSPMPSRSTP DNMEAIEEAN TPSNKKSPES ALHESPIDLP GPIETQAAPI TRWLADRTDN  240
LVTNEANISH MPLHGHVDGG AKVVPSVGSL AQLIDPPKKN VDTDEYAATF AAPMLRDEEN  300
AFISEFPQGP IGDFDGNMKD HDPLQDFLNQ TLADPDEHSS TASKNQYDSD TGIMPTEFEN  360
HGIMQGNFLD GPNWLENLNF VPDDTIPQLS ALYENAPLLP YDTTDQDVLS MDSGAESLQE  420
LFNSMEDSSG KRDGWSNEPA LQGTGIAIIP RQLQSAMQPN YLISQQGSAP RRIRLQASFS  480
ANTESGESMT GDEIENEESG IVTSKYLNGA VEESTAEKDV PSDGDDAEST GITIRSRRPA  540
PSSSSDSSFT QQGTAVRRLR LQLNLNAGPC VSVDGSSSCI IDENESEHKA EKAEIEEHAN  600
TDFAERVGLS GNSRVDEQKN THKHDAAKLV PEAKSVLRLR KTAEESAKEN KQEGALDSHL  660
SAPRKKGGFP AYIIWLVLAV ALMLLVCVGI YGWV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-45816416166NO APICAL MERISTEM PROTEIN
1ut4_B1e-45816416166NO APICAL MERISTEM PROTEIN
1ut7_A1e-45816416166NO APICAL MERISTEM PROTEIN
1ut7_B1e-45816416166NO APICAL MERISTEM PROTEIN
3swm_A9e-46816419169NAC domain-containing protein 19
3swm_B9e-46816419169NAC domain-containing protein 19
3swm_C9e-46816419169NAC domain-containing protein 19
3swm_D9e-46816419169NAC domain-containing protein 19
3swp_A9e-46816419169NAC domain-containing protein 19
3swp_B9e-46816419169NAC domain-containing protein 19
3swp_C9e-46816419169NAC domain-containing protein 19
3swp_D9e-46816419169NAC domain-containing protein 19
4dul_A1e-45816416166NAC domain-containing protein 19
4dul_B1e-45816416166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000383G0210
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015650289.10.0NAC domain-containing protein 14 isoform X2
TrEMBLA0A0A9CTY00.0A0A0A9CTY0_ARUDO; Uncharacterized protein
STRINGOPUNC08G03310.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-70NAC 014