PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000276G1150
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 519aa    MW: 54703 Da    PI: 8.8104
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000276G1150genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.4e-08345390853
                      HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                      +r   NR A r++R++Kka +  Lee+v +L a N++L k+l++ +
  PH01000276G1150 345 KRPSGNRAAVRKYREKKKAHTVSLEEEVVQLRALNQQLVKKLQNHT 390
                      45556**********************************9999754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF069114.6E-262110IPR009686Senescence/spartin-associated
Gene3DG3DSA:1.20.5.1701.1E-12338406No hitNo description
SMARTSM003381.5E-7339405IPR004827Basic-leucine zipper domain
PfamPF077161.8E-12343395IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6344391No hitNo description
CDDcd146861.02E-10344397No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MSEKVATGIL SGVVKVTGYF TSSLANSKAG KKFFSLLPGE IVLASLDGFG KICDAVEVAG  60
KNVLSTSSTV TTGLVSHKYG EKAAAATNEG LDAAGHAIGT AWAVFKIRQA LNPKSVLKPT  120
SLAKSTIKAA AADLRAKHSR GLSDTGAPQR LGDDPASSRA AQSIRSGGEE RSSSGGARLS  180
SSRAESFLCR SLSSRLGKIG RILDTLYARN SGIAEKSRPT RVQFVPATHS PPPILVGLGG  240
TTRVCSSLLV ATMDDGDLDF SNPDAFLCPA IGTDTPGSCS MDSYFDDILK DTEHHACTHT  300
HTCNSPVHDL SHTHTCVHVH TKVVSAPSDT AETPESPAEN NVSRKRPSGN RAAVRKYREK  360
KKAHTVSLEE EVVQLRALNQ QLVKKLQNHT ALEAEVARLR CLLVDIRGRI EGEIGAFPYQ  420
RPVKNINLVS SVDQGSYLGG AQVMNSCDFR CNDQMYCSPG MRTMGEDGSM SGQVLGQGVC  480
DVANIQCMGS AKSGSTKLPG RGCMGTMPAG CVPNVEKK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000276G1150
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0942090.0FP094209.1 Phyllostachys edulis cDNA clone: bphyem105j23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642505.11e-168basic leucine zipper 19
RefseqXP_015642506.11e-168basic leucine zipper 19
TrEMBLA0A0D9WU691e-167A0A0D9WU69_9ORYZ; Uncharacterized protein
STRINGLPERR06G23100.11e-168(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.12e-53bZIP family protein