PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000261G1230
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 322aa    MW: 35159.7 Da    PI: 8.9582
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000261G1230genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.3e-14246288547
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lk 
  PH01000261G1230 246 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKR 288
                      79**************************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-14239289No hitNo description
SMARTSM003389.0E-15242305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.679244289IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11246289No hitNo description
CDDcd147075.03E-25246298No hitNo description
PfamPF001708.8E-12246288IPR004827Basic-leucine zipper domain
PROSITE patternPS000360249264IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MASQTGGGTG GDAGSVQRGQ MQSLARQGSL YYSLTLNEVQ NQLGEPLLSM NLDELLKSVF  60
GGASQSEPTL GMQRQGSITM PPELSKKTVD EVWKGIQDAP KRSAEEGGRR RRVRQPMLGE  120
MTLEDFLVKA GVVTEGYLKD SNDLSGNMDV GSSVVAAGAS NLNPRSQWLQ QYQQQALEPQ  180
HPSMVASYMA SQLAPQPLGV ATGAILESIY SDGQIASPVL GALSDPQTPG RKRGASGEMA  240
NKRVERRQKR MIKNRESAAR SRARKQAYTN ELENKVSRLE EENERLKRQK MVNYFCFTLA  300
NYCFLDGVFL LFMVVDDIGN G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107114GRRRRVRQ
2241248KRVERRQK
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000261G1230
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638736.11e-147ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3
SwissprotQ9LES36e-70AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLB9FKV81e-145B9FKV8_ORYSJ; Uncharacterized protein
TrEMBLQ6AVM51e-145Q6AVM5_ORYSJ; BZIP transcription factor
STRINGOS05T0489700-011e-146(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.19e-69ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]