PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000242G0910
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 394aa    MW: 41940.3 Da    PI: 9.9259
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000242G0910genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.61e-21257319163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr +rkq+NRe+ArrsR+RK+ e+eeL++ v++L+aeN++L++e+++l++ ++kl+s++
  PH01000242G0910 257 ERELKRDKRKQSNRESARRSRLRKQTETEELATQVESLTAENTSLRSEISRLTESSKKLRSDN 319
                      89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.2E-1844105IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.3E-17251317No hitNo description
SMARTSM003383.9E-22257321IPR004827Basic-leucine zipper domain
PfamPF001705.0E-20257319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.116259322IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-11260316No hitNo description
CDDcd147024.25E-20262310No hitNo description
PROSITE patternPS000360264279IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MGETGSSSYA FAAFPGELVV LRTSRKGMAH DEAVATQKTG KTASPPKAYY GPGILPPTYF  60
TPGIAPGHAP QPYMWGPQPL MPPPFGTPYA AMYPHVGAYP HPLVPMMANP LSMEPAKSAN  120
SKEKSSNKKL KEIDGTAVSV GSGDSKKTMS SSGDYSTQGS SDVNDLKVSK TSRKRSLDEG  180
PGAETTAAAK MEDVLAPNHV LGDTAILPNH CFPSPVIKPS ATNVANSRAR GTPITPMPGV  240
MVSSHTGVST ELSIKDEREL KRDKRKQSNR ESARRSRLRK QTETEELATQ VESLTAENTS  300
LRSEISRLTE SSKKLRSDNS ALMVKLKDTA APNNVEVSLE KRAASSSPRV VENFLSMIDD  360
TNKPGIGRHT EHGESKLRQL LGSSPATDAV AAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273279RRSRLRK
2273280RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000242G0910
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640745.10.0common plant regulatory factor 1
TrEMBLA0A0E0D6G90.0A0A0E0D6G9_9ORYZ; Uncharacterized protein
STRINGOMERI03G29550.10.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-41G-box binding factor 3