PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000149G0850
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 267aa    MW: 28785.2 Da    PI: 5.0599
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000149G0850genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20130178355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r +lg+f+taeeAa+a++ a+++++g
  PH01000149G0850 130 YRGVRQRP-WGKWAAEIRDPR----RaARKWLGTFDTAEEAARAYDCAALEFRG 178
                      9*******.**********82....48*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.2E-32129187IPR001471AP2/ERF domain
SMARTSM003803.6E-35129192IPR001471AP2/ERF domain
PROSITE profilePS5103225.515129186IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-23129187IPR016177DNA-binding domain
PRINTSPR003671.3E-11130141IPR001471AP2/ERF domain
CDDcd000184.54E-32130187No hitNo description
PfamPF008471.7E-14130178IPR001471AP2/ERF domain
PRINTSPR003671.3E-11152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MATTKQYFKT RFDDHGRQAS SSADANTVME FAGQLISAKQ EHSIIVAALR YVVSGCSTAP  60
PEIVSVACGE ACSLCGIDGC AFDGCLGCDF FGAEAGAPEM VQEVNCGTEQ MAAAAPAGAQ  120
RRRRRKKNMY RGVRQRPWGK WAAEIRDPRR AARKWLGTFD TAEEAARAYD CAALEFRGPR  180
AKLNFPHYEP LPGQKNGNGG DAVPVAKTEN LTPSPCSVDA EERTPGEWEL GVDESGDHLW  240
EGLQDLMKLD EGDLWFAPFS GAASSI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-211301871573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120126RRRRRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000149G0850
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660699.14e-97PREDICTED: ethylene-responsive transcription factor ERF109-like
RefseqXP_015611044.25e-97ethylene-responsive transcription factor ERF109
TrEMBLA0A1E5WBD21e-102A0A1E5WBD2_9POAL; Uncharacterized protein
STRINGOPUNC09G11150.11e-101(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-26redox responsive transcription factor 1