PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000145G1240 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 152aa MW: 16073 Da PI: 8.2607 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.5 | 5.3e-12 | 33 | 73 | 4 | 44 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 +r++r+ +NRe+ArrsR RK+ ++ L+ v++L eN PH01000145G1240 33 QRRAKRMLSNRESARRSRVRKQRHLDDLTAQVAQLRRENAH 73 689************************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-14 | 30 | 94 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.806 | 32 | 74 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.7E-11 | 33 | 73 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.31E-11 | 34 | 83 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-9 | 34 | 106 | No hit | No description |
CDD | cd14702 | 1.80E-15 | 35 | 83 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 37 | 52 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009744 | Biological Process | response to sucrose | ||||
GO:0080149 | Biological Process | sucrose induced translational repression | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence Send to blast |
MASSSGSGST GSLSAATAGG SSTEEELRAL MEQRRAKRML SNRESARRSR VRKQRHLDDL 60 TAQVAQLRRE NAHVVTALGL TTQGLLAVDA ENSVLRTQAA ELAARLHSLN DILSCMSNNG 120 AAVAFTVAAA ADPLLGFDDI FRSSPEMFQP C* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 52 | RRSRVRK |
2 | 46 | 53 | RRSRVRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:18088315, ECO:0000269|PubMed:21534971, ECO:0000269|PubMed:24861440}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00470 | DAP | Transfer from AT4G34590 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000145G1240 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:15208401, ECO:0000269|PubMed:9620274, ECO:0000269|PubMed:9721683}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK070887 | 2e-95 | AK070887.1 Oryza sativa Japonica Group cDNA clone:J023064O22, full insert sequence. | |||
GenBank | AP004997 | 2e-95 | AP004997.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0030G11. | |||
GenBank | AP014958 | 2e-95 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015689573.1 | 2e-70 | PREDICTED: ocs element-binding factor 1-like | ||||
Swissprot | O65683 | 3e-36 | BZP11_ARATH; bZIP transcription factor 11 | ||||
TrEMBL | A0A0E0JV62 | 2e-63 | A0A0E0JV62_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC02G02000.1 | 4e-64 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4459 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34590.1 | 1e-27 | G-box binding factor 6 |