PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000131G0820
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 382aa    MW: 41270.4 Da    PI: 8.2384
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000131G0820genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.7e-11230285560
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                      kr +r   NR++A +s +RK +++ eLe+kv++L+ e ++L  ++ + +  +a l 
  PH01000131G0820 230 KRVKRILNNRVSAAKSKERKVKYMSELERKVQVLQMEATTLSAQVTMVQRDYAGLA 285
                      899***************************************99998888877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-14226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.358228291IPR004827Basic-leucine zipper domain
PfamPF001704.3E-9230284IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.74E-11230282No hitNo description
Gene3DG3DSA:1.20.5.1707.2E-12230285No hitNo description
CDDcd147031.50E-19231282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MDSLAPPPYA DLAAPAAIPF SPPPPSSSFD RGPSGLQPLR AGHRRSQSDI LLGFSQPNLH  60
MPPPALVKRE AAAAEGRKSV DNTTLDGLVG SYMNPMGLGV LGSSGDGTPE RRDHLESQVC  120
DPRAWSPAES SENEAESEGG SMPRHCRSLS VDSFIGKFNF GAAGQEPSNL PLPSPGEGSA  180
GGLSRSGSGS IGGAAALFAT EFANGEFSEA EKKKIIANER LTEIVLTDPK RVKRILNNRV  240
SAAKSKERKV KYMSELERKV QVLQMEATTL SAQVTMVQRD YAGLATRNKE MKIRLQGMEQ  300
QAQLRDALNE ALSAEVQRLK LAAGEVSDAH MPNSSHQQMI SQVIQLQQLQ IQRRPSQPQQ  360
AQQQQTQQSA RLEAQQQQWN F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000131G0820
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576738.11e-126transcription factor RF2a
TrEMBLA0A3B6LQG61e-138A0A3B6LQG6_WHEAT; Uncharacterized protein
STRINGMLOC_51623.11e-131(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148701820
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.35e-58bZIP family protein