PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000098G1180
Common NameDREB2
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 259aa    MW: 28660.7 Da    PI: 4.7701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000098G1180genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1955105155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++y+GVr++  +g+WvAeIr+p   + r kr +lg+f ta eAa a+++a+++++g
  PH01000098G1180  55 CDYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGSFPTALEAAHAYDEAARAMYG 105
                      68*****999.**********8...3.35************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.6E-1455105IPR001471AP2/ERF domain
CDDcd000184.54E-3055115No hitNo description
SMARTSM003806.8E-3556119IPR001471AP2/ERF domain
PROSITE profilePS5103221.77356113IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-2057113IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.1E-3157114IPR001471AP2/ERF domain
PRINTSPR003674.2E-95768IPR001471AP2/ERF domain
PRINTSPR003674.2E-97995IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MRRKSTGPDS IAETIKRWKE QNQKLKEENA SRKAPAKGSK KGCMAGKGGP ENSNCDYRGV  60
RQRTWGKWVA EIREPNRGKR LWLGSFPTAL EAAHAYDEAA RAMYGSAARV NFSEHSVDAN  120
SGCTSAPSLL MSNGPTAALN QSDAKDELES PPFLVSNGPT AVLHQSDEKD ELESVEAELH  180
EVKTEVSDDL GNIHEEQKTL EVFQPEGSVL HKEVNVSNDY FNVEELLKMI IVELNADQKM  240
EVHEEYQDGD DGFSLFSY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-1657112359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A2e-15571231581Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000098G1180
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2954820.0EU295482.1 Phyllostachys edulis DRE-binding protein DREB2 (DREB2) mRNA, complete cds.
GenBankEU2954830.0EU295483.1 Phyllostachys edulis DRE-binding protein DREB2 (DREB2) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024314715.11e-155dehydration-responsive element-binding protein 2A isoform X4
SwissprotA2WL191e-147DRE2A_ORYSI; Dehydration-responsive element-binding protein 2A
TrEMBLA9YUA20.0A9YUA2_9POAL; DRE-binding protein DREB2
STRINGBRADI2G04000.11e-154(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73153551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-38ERF family protein