PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000043G1650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 125aa MW: 14003.9 Da PI: 8.2423 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.8 | 4e-07 | 28 | 66 | 21 | 59 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 R RKk+++ e ++ v +L eN++L++e++ l+ + +l PH01000043G1650 28 RPRKKMRLPEVQQLVRSLAVENESLREEMQALQRACTAL 66 89*******************************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.5E-5 | 28 | 66 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MALRRMVSSI GRPHLTFPAP PPQPTGQRPR KKMRLPEVQQ LVRSLAVENE SLREEMQALQ 60 RACTALSKEN DKLETRLEQS NPQNETAPKE RKGKQQLDQQ SPEDCFVLPD LNLPAQDVAD 120 GSVH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 33 | RPRKKMR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000043G1650 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010233917.1 | 1e-51 | uncharacterized protein LOC100835852 | ||||
Refseq | XP_025794244.1 | 1e-51 | uncharacterized protein LOC112874890 isoform X1 | ||||
TrEMBL | M0VQ72 | 1e-54 | M0VQ72_HORVV; Uncharacterized protein | ||||
STRING | MLOC_36367.1 | 2e-55 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3790 | 29 | 51 |