PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000029G2070
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 332aa    MW: 36727.4 Da    PI: 9.4636
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000029G2070genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.34.6e-15262307551
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lk + +e
  PH01000029G2070 262 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLK-RQKE 307
                      69***************************************9.4444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-12258329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.634260305IPR004827Basic-leucine zipper domain
PfamPF001705.9E-13262305IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-11262307No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-14262306No hitNo description
CDDcd147073.64E-25262312No hitNo description
PROSITE patternPS000360265280IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MADARRRRNS DKCGGVIAPA QRDQMQNLAK QGSLYSLTLD EVQNHLGEPL HSMNLDELLR  60
TVFPDGVDPD GATTSQYESS SGLLHQGSIT MPPELSKKTV DEVWKGIQDA PKRKIEEGVR  120
RRRERQPTLG ETTLEDFLVK AGVVTEGYLK DLNDVGNVDL VGRGARAAGA ADLTSGAQWL  180
EQYQQQIAAL EPHQHGQQRM PGAYMPSRLV PQPLNVGPGA ILESAYSDGQ ITSPMIGALS  240
DSQTPGRKRG IPGNVANKLI ERRQKRMIKN RESAARSRAR KQAYTNELEN KVSRLEEENE  300
RLKRQKELDL LCSVPLPEPK YQLRRTSSAA F*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000029G2070
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818578.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9LES37e-81AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3L6R4U20.0A0A3L6R4U2_PANMI; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRINGPavir.Eb03523.1.p0.0(Panicum virgatum)
STRINGPavir.J38875.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-83ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]