PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000009G0320
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 523aa    MW: 55119.8 Da    PI: 8.7113
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000009G0320genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1513.2e-16257300548
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lk +
  PH01000009G0320 257 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENDRLKRQ 300
                      69*************************************99964 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.7E-13253317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.542255300IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-14255300No hitNo description
CDDcd147072.53E-26257302No hitNo description
PfamPF001703.5E-13257300IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-11257302No hitNo description
PROSITE patternPS000360260275IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MASRSGGYGD AGTAQGGQMQ NLARQGSLYS LTLDEVQNHL GEPLHSMNLD ELLRTVFPDG  60
VDPDGGATTS QYEPSSGLLR QGSITMPPEL SKKTVDEVWK GIQDAPKRNI EEGGCRRQER  120
QPTFGEMTLE DFLVKAGIVT EGYLKDLNDV GNMDLVGRGA TAAGAADLTS GAQWLEQYQQ  180
QIAAIEPHQH GQHSMPGAYM PSRLVPQPLN IGPGAILESA YSDGQNTSPM IGALSDSHTP  240
GRKRGIPGDV ADKLIERRQK RMIKNRESAA RSRARKQAYT NELENKVSRL EEENDRLKRQ  300
KEPSAADVLD DKSPTIAYNV FGALFARMNS ASEQRNGCAR DVTTSQPPTC RTPHLQRHVV  360
GRSCREDRGC LGKRHVKRRT CSTNTTTGCD SRGSTVTSSD IIVIATTSAG SNVACRGDIA  420
TEIGRISATV ASFVSEVASA DGTMAGFGTT PTTIVKGGMA AGAASSKPSP GVAATAAGAA  480
PSKPSLGATM TTTGAAPSKP SLGVTVPGSP ALAFSKRVIR SL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000009G0320
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818578.11e-170ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A2S3HQM91e-168A0A2S3HQM9_9POAL; Uncharacterized protein
STRINGPavir.Eb03523.1.p1e-171(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-72ABA-responsive element binding protein 3