PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.F01712.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 218aa MW: 23590.2 Da PI: 9.3045 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.8 | 8.6e-12 | 106 | 156 | 3 | 53 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ Pahal.F01712.1 106 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVSHLRGANRRLLDELNRAL 156 67899******************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-9 | 103 | 155 | No hit | No description |
SMART | SM00338 | 1.3E-9 | 104 | 175 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-9 | 105 | 154 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.427 | 106 | 176 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.49E-10 | 108 | 155 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 111 | 126 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.36E-12 | 115 | 157 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MYHHFHGEVA SLRLLSPPNA SFAAHHHMNM ALPPQAYFPP SFEPASAFQD AASLLAGDVA 60 SFELDTVFRE AAHLAGRNGS PSSGSGSDGA AGSGYPMNTV AVAAEEERRR RRMVSNRESA 120 RRSRMRKQRQ LSELWAQVSH LRGANRRLLD ELNRALRGCA DARRESARLR NEKAELAKKL 180 EQLLQSATAT EKGAAAASSD RSCSSEPCNN TSADTSE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 127 | RRSRMRKQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 4e-97 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821559.1 | 1e-156 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A2S3I3E9 | 1e-155 | A0A2S3I3E9_9POAL; Uncharacterized protein | ||||
STRING | Si014433m | 5e-97 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 2e-08 | basic leucine-zipper 58 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.F01712.1 |