PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.F00768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 21109.7 Da PI: 7.7262 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.3 | 3.2e-12 | 37 | 85 | 4 | 56 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +GVr +k +grW+AeIr+p++ r + ++g+f + Aa a++aa +++ge Pahal.F00768.1 37 TGVRPRK-SGRWAAEIRVPTT---REKLWIGTFESDRLAALAYDAAVFCFYGE 85 69*9777.8*********976...49*********99**********999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.4E-20 | 35 | 96 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-14 | 35 | 96 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 18.334 | 35 | 96 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.2E-19 | 35 | 102 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.71E-17 | 38 | 98 | No hit | No description |
Pfam | PF00847 | 4.1E-7 | 38 | 84 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MAALATNGSG AARRGTAWSG GGQPGVAFGR QKQSEWTGVR PRKSGRWAAE IRVPTTREKL 60 WIGTFESDRL AALAYDAAVF CFYGEDLPKT RRFNFPVAPR PDVPKILRGH LNVASVKAIA 120 EHHARSVDAV LPPLVRDAAA ALAAAATATE AGPSAGTTTY HDAPIAMADN NPVASAVDDG 180 QFSFDAHVIA GLMDLEPGEY * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822464.1 | 1e-144 | ethylene-responsive transcription factor ERF011-like | ||||
TrEMBL | A0A2S3I3Y8 | 1e-142 | A0A2S3I3Y8_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Fb01907.1.p | 6e-93 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5444 | 25 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 1e-17 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.F00768.1 |