PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.F00431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 149aa MW: 16162.4 Da PI: 10.2737 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.8 | 9.5e-13 | 65 | 107 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r rk+kNRe+A rsR+R++a++ eLe++v L ae ++L+ Pahal.F00431.1 65 RRRERKMKNRESAARSRARRLAYVNELEKEVSLLRAEKEELRR 107 7889**********************************98874 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-9 | 61 | 130 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.415 | 63 | 107 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.1E-12 | 65 | 110 | No hit | No description |
Pfam | PF00170 | 7.3E-10 | 65 | 110 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.88E-11 | 65 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 83 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MEPQRGGEQL AWGATGAASP CLCPAAVASS AAGAPAGNVF PRQALEQEML RRAELQLQGG 60 GGGDRRRERK MKNRESAARS RARRLAYVNE LEKEVSLLRA EKEELRRLCE EVGSGMLLPH 120 CFQLKEAAEA PAKRGPHQRL QRTSSAPF* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025820332.1 | 1e-100 | protein FD-like isoform X1 | ||||
TrEMBL | A0A2S3I4L9 | 4e-99 | A0A2S3I4L9_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Fa00021.1.p | 1e-49 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.F00431.1 |