PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.D01904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 178aa MW: 19556.5 Da PI: 9.1888 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00064 | 37 | 59 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k s++ ++ +H ++H Pahal.D01904.1 37 FVCLVCTKESSSQQHMAVHCKKH 59 89********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MEDQTWEAYF TDTPPPEPSL TKIITDLRKR VLVSPIFVCL VCTKESSSQQ HMAVHCKKHV 60 QAGMAKGTVK HIKYYPDHTT CHFFGINPQP TTPQDSGSAN RVKQVPMPSY KTVLYYAGDA 120 FVSHLASMLP ENPNGVGPII APIGNRSNID LTLRLGSTRG TIADVSIVRL LRARPVE* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025813180.1 | 1e-120 | uncharacterized protein LOC112890514 | ||||
TrEMBL | A0A2T7E037 | 1e-123 | A0A2T7E037_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Db01013.1.p | 1e-106 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12125 | 2 | 3 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.D01904.1 |