PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.D01759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 20399.8 Da PI: 10.996 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 91 | 149 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r rr ++NRe+ArrsR RK+ ++ +L ++ L + N++L ++l++ +++++ + Pahal.D01759.1 91 ERRRRRTASNRESARRSRVRKQRQLSQLWAQAAHLRGDNRDLLDRLNRAIRDCDRVRRD 149 5899*******************************************998888877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-9 | 88 | 152 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-6 | 89 | 146 | No hit | No description |
PROSITE profile | PS50217 | 10.266 | 90 | 153 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.5E-9 | 90 | 147 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.22E-9 | 92 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 6.54E-13 | 99 | 144 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MYPGEVASVV LPYLPTAAAA AFGFGPHYHP PAGDHFLFPG ISTDLLTLPY AATAAHCQQH 60 PAGHQPFLDH APGPHDEAAG GVERRRQLAE ERRRRRTASN RESARRSRVR KQRQLSQLWA 120 QAAHLRGDNR DLLDRLNRAI RDCDRVRRDN ARLGRERAGL QRRLHELAAG GDDDGSSRIA 180 ATAT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 96 | RRRRRT |
2 | 104 | 110 | RRSRVRK |
3 | 104 | 111 | RRSRVRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025813468.1 | 1e-130 | basic leucine zipper 8-like | ||||
TrEMBL | A0A2S3HJ48 | 1e-128 | A0A2S3HJ48_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7DZ27 | 1e-128 | A0A2T7DZ27_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Db01631.1.p | 2e-81 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.D01759.1 |