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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.C01662.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
C2H2 |
| Protein Properties |
Length: 308aa MW: 33029.8 Da PI: 4.3131 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.C01662.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.3 | 5.6e-05 | 282 | 304 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+k+Fs+ + L++H + H
Pahal.C01662.1 282 TCKSCSKTFSSDMALQSHSKAkH 304
7*****************88777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MEFWGLEVKP GTTVKCDPSD GYILHLSQAA LGESKKSDNA LMYVKVDDQK LAIGTLSPDK 60
YPQIQFDLVF DKEFELSHTS KAASVFFSGY KVEQPGVGDD MDFDSEEDED EEEELNIPVI 120
KENGKAQGKE EQKSKAGPVA SKSSAAVKDV EKKSKDEDES DEDETDDDSD DEDLSPEEGD 180
DDDSSDEGDS SEDDEDSEDD EEEETPTPKK PEVGKKRAAE NALKTPVSGK KAKVATPSGQ 240
KTGGKKGAAH VATPHPAKVV SKTPANNDKS KEKSPKSGGS VTCKSCSKTF SSDMALQSHS 300
KAKHGGK*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
