PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.C00083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | G2-like | ||||||||
Protein Properties | Length: 465aa MW: 50439.6 Da PI: 8.2991 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.9 | 3.5e-31 | 81 | 134 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++F++av++LGG+++AtPk +l+lm+vkgL++ hvkSHLQ+YR+ Pahal.C00083.1 81 PRLRWTPELHHCFLRAVDRLGGQDRATPKLVLQLMNVKGLSIGHVKSHLQMYRS 134 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.0E-29 | 77 | 135 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 13.026 | 77 | 137 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.36E-15 | 78 | 135 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.1E-23 | 80 | 136 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.0E-8 | 82 | 133 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence Send to blast |
MEGSTKELLE YSSSTTDHQL QSSSAEAEDA AAAAADVPHD GSSSNNSSTV ELDEAGGGGD 60 SSRKTAASPS SVRPYVRSKN PRLRWTPELH HCFLRAVDRL GGQDRATPKL VLQLMNVKGL 120 SIGHVKSHLQ MYRSKKIDDS GQVIGGYSWR DDHHPLQQEG GQVYNLGHLS GLHHGQTTGA 180 ASTTTLLSAR CRQARNRSNQ SSRNKQQQLI GHPGNMWTEN PLVRDAGAAV LTGLAAAVVL 240 RLWEEVASRA LLEQKLCRKL VHITVGLVYF LMWPLFSSDD VYAPFLAPLI IVINIIKVTV 300 IGVGVVKDEG VVNSMTRHGD YRELLKGPLY YACAITLTTI VFWRTSPISI AVICNLCAGD 360 GVADIAGRRF GQVKLPHNPE KSYAGSIAMF MAGFIASVLY MCYFNIFGFV EKSWTMVGAF 420 GAISLAAAVV ESLPISTRLD DNLTVPLASG FVLHWSHKPV LHEH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 6e-18 | 82 | 136 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-18 | 82 | 136 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-18 | 82 | 136 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-18 | 82 | 136 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 6e-18 | 82 | 136 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytol monophosphate (PMP) (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025807942.1 | 1e-170 | probable phytol kinase 2, chloroplastic | ||||
Refseq | XP_025827653.1 | 1e-170 | probable phytol kinase 2, chloroplastic | ||||
Swissprot | Q5N9J9 | 3e-97 | PHYK2_ORYSJ; Probable phytol kinase 2, chloroplastic | ||||
TrEMBL | A0A2T8I6X3 | 1e-169 | A0A2T8I6X3_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J01621.1.p | 1e-157 | (Panicum virgatum) | ||||
STRING | Si012637m | 1e-157 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 1e-36 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.C00083.1 |
Publications ? help Back to Top | |||
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