PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.A03457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 357aa MW: 38231.8 Da PI: 9.9607 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.2 | 5e-15 | 276 | 328 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkev 56 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L kk++e+l+k+ Pahal.A03457.1 276 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNEELqKKQIEMLEKQK 328 79***************************************445688888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-15 | 270 | 331 | No hit | No description |
SMART | SM00338 | 4.2E-14 | 272 | 337 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.978 | 274 | 319 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-13 | 276 | 329 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-10 | 276 | 326 | No hit | No description |
CDD | cd14707 | 5.66E-25 | 276 | 328 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 279 | 294 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1900057 | Biological Process | positive regulation of leaf senescence | ||||
GO:1903648 | Biological Process | positive regulation of chlorophyll catabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MDFPGGSGRR PQQPEPEHLP PMTPLPLARQ GSVYSLTFDE FQSALGGAGK DFGSMNMDEL 60 LRSIWTAEET HAVAAANAAA ASAAAADHAA RAASIQRQGS LTLPRTLSQK TVDEVWRDIM 120 CFGGPSAAQA EAAVAPPPPA QRQQTLGEIT LEEFLVRAGV VREDMTAPPP VPPVPVTALQ 180 PPPPPQPPML FPHGNVFAPL APPPLSFGNG LVSGAIGQGG GAAPSAVSPV RPVTSNGFGK 240 MEGGDLSSLS PSPVPYVFNG GLRGRKPPAM EKVVERRQRR MIKNRESAAR SRQRKQAYMM 300 ELEAEVAKLK ELNEELQKKQ IEMLEKQKNE VLERMSRQVG PTAKRICLRR TLTGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025799480.1 | 0.0 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 1e-169 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A2S3GTZ2 | 0.0 | A0A2S3GTZ2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J00256.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.3 | 1e-40 | ABRE binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.A03457.1 |