PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.A01898.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bHLH | ||||||||
Protein Properties | Length: 164aa MW: 16428.2 Da PI: 7.4197 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.6 | 7e-06 | 96 | 118 | 9 | 30 |
HHHHHHHHHHHHHHHHCTSCC.C CS HLH 9 ErrRRdriNsafeeLrellPk.a 30 +rRR++iN+++ ++l+P+ + Pahal.A01898.1 96 AQRRRSKINEKMKAMQSLIPElL 118 69******************944 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 2.2E-5 | 97 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MDEQGFGSFM GDAGRCGTRG AGGNSALAAS APPPAAAAAG GRGGGGDTMP DVRRGHDVPG 60 GGAGAGPRPA GGLREDAGGL GDSDASGLEP EPEAAAQRRR SKINEKMKAM QSLIPELLPT 120 YLAAVACWKI GNWGILGREK GSVNIADSVR SARWTGSYDH TQL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 39 | 45 | GGRGGGG |
Link Out ? help Back to Top | |
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Phytozome | Pahal.A01898.1 |