 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pgl017860 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
LFY |
| Protein Properties |
Length: 309aa MW: 34888.7 Da PI: 5.9168 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pgl#S55333567 | PU_ref | Unigene | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 317.4 | 3.6e-97 | 1 | 297 | 1 | 281 |
FLO_LFY 1 mdpeafsaslfkwdpraaa..aapparlleeaavseapleaaaaaaark.lreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseif 97
md+e+f++ +f+wd+r+a aap+a+ + ++ + +ple ++ rk l++le+lf++yGvry+t+ak++e+Gft++tLv+m++ee++dlmk+l+ei+
Pgl017860 1 MDAEHFPVGFFRWDQRPAPaaAAPAATTTVFNKDHGRPLEIILPMNGRKeLKSLEDLFREYGVRYSTLAKMTEMGFTANTLVNMTEEEIEDLMKTLVEIY 100
9*************777662233333333333445677888999998888************************************************** PP
FLO_LFY 98 rldllvGeryGikaavraerrrlee..........eeaekkrrkllsedeetaldalsqeglseepvqe..eke.aagsggeglgeaelvaaeekkseee 184
++dll+GeryGik+a+rae++rl++ +e ++r+++l++d++t a+++eg+s+e +++ ++ +++s+++ ++ ++ + ++ +++
Pgl017860 101 HMDLLIGERYGIKSAIRAEKKRLQDclemqrleilSE--AERKRILHDDHNTFAAAMTSEGTSKELKANdpLIFpESTSADHAPMNIASCKDSTLILQNS 198
******************************9997544..5555679*******************99995533345555444434433333333333333 PP
FLO_LFY 185 kkkaskkkqkrk..kkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkv 281
++ + ++++++ e++ d+++++ + +++ gedge+r+rehPfivtepge+argkknGLDYLfdLyeqC++fLl+vq+iake+GekcPtkv
Pgl017860 199 NQAQFCGSGLIGvpEHSSESDERKADTNKQKRRRSKEPGEDGEDRPREHPFIVTEPGELARGKKNGLDYLFDLYEQCGKFLLEVQRIAKEKGEKCPTKV 297
33332222222200222222334455566666677789************************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MDAEHFPVGF FRWDQRPAPA AAAPAATTTV FNKDHGRPLE IILPMNGRKE LKSLEDLFRE 60
YGVRYSTLAK MTEMGFTANT LVNMTEEEIE DLMKTLVEIY HMDLLIGERY GIKSAIRAEK 120
KRLQDCLEMQ RLEILSEAER KRILHDDHNT FAAAMTSEGT SKELKANDPL IFPESTSADH 180
APMNIASCKD STLILQNSNQ AQFCGSGLIG VPEHSSESDE RKADTNKQKR RRSKEPGEDG 240
EDRPREHPFI VTEPGELARG KKNGLDYLFD LYEQCGKFLL EVQRIAKEKG EKCPTKVFGL 300
LKTLLQGSP
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in both male and female cones, vegetative buds and needles, but not in the roots. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-26 | floral meristem identity control protein LEAFY (LFY) |
