PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl017533

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Dof

Protein Properties

Length: 333aa MW: 37034.9 Da PI: 7.7577

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S55347175	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121	4.1e-38	115	174	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k ++cprC+s++tkfCy+nny+++qPr+fCk+CrryWt+GG++rn+PvG+grrk+k+ Pgl017533 115 PSKPVACPRCHSSETKFCYFNNYNVNQPRHFCKNCRRYWTAGGTMRNIPVGAGRRKSKHF 174 67899****************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	114	172	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-31	118	173	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.323	119	173	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	121	157	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MCKSSLGQAC NVDCESETRN FVIKLFGTTI SVSVSDGKAD EFLQEDACKR PAQPFKTENL 60 GERKAKSLRT ENILEKSVKS QSSCDGGEKS LKPLRFEEFA DGKSEKASER APPKPSKPVA 120 CPRCHSSETK FCYFNNYNVN QPRHFCKNCR RYWTAGGTMR NIPVGAGRRK SKHFTTFQLH 180 SASKSLDLQE PEMRIENFEE PVNETRIFSF NDESTSISSV TGVAGIDMKV PCLEEMDATI 240 SDSFVNSLTV NGVSGTGFSN LMDPGLKIKA ISTENSQWIP EIQQNGNSSL LADCRVLYGK 300 PMIPNCTQQA AEYGFIEKLC ISLHIRLHAF SVY

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.2509	0.0	stem

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	T2B8N3	0.0	T2B8N3_PINPS; Dof4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-33	cycling DOF factor 3