PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl016084
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 277aa    MW: 31280.9 Da    PI: 7.3255
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55349703PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.83.9e-31207259254
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                pr+rWt++LHe+Fv+ave LGG+e+AtPk++lelm+vkgL ++hvkSHLQ+YR
  Pgl016084 207 PRMRWTSTLHEHFVRAVELLGGHERATPKSVLELMNVKGLNVAHVKSHLQMYR 259
                9**************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.24E-15204259IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-27204261IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22207259IPR006447Myb domain, plants
PfamPF002491.3E-7208259IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
XSEEYSSKCG DGSKRSRQRD DEVPLELSLA SSDFQEGRPA NGSYLDQYYS ITINGFPLFQ  60
KPIGEGQGHR NICTQGLMRL SGGQEDPRLI VSYFSGGEKR EAIEDASSLA GLVDSYSGHG  120
FQVVVDKEDY RCSDEFLSDN RAEEDSLFRP HEDILMNRMM TPNHPHKDIS IPPKEVRSCN  180
RSTVMASDSH YCMKSRFMSQ IKRMRAPRMR WTSTLHEHFV RAVELLGGHE RATPKSVLEL  240
MNVKGLNVAH VKSHLQMYRG MKVTGKSACS SDIYQLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-17208259354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-17208259354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-17208259354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-17208259354Protein PHOSPHATE STARVATION RESPONSE 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11318KRSRQR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.225730.0root
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.16e-33G2-like family protein