PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pgl015869 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 202aa MW: 22482.9 Da PI: 5.4528 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 51.2 | 2.5e-16 | 142 | 169 | 2 | 29 |
--SS-EEEEEEE--TT-SS-EEEEEE-S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCts 29 +D ++WrKYGqK++kgs++pr+YYrC++ Pgl015869 142 SDMWAWRKYGQKPIKGSPYPRGYYRCSF 169 69************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.3E-15 | 136 | 169 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-13 | 139 | 169 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-7 | 141 | 180 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.765 | 142 | 180 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.0E-11 | 143 | 170 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MVLEDHCCNE IKGEEMGKGF QLPIRRTRXN QMNEGEFMSG TSIVKQELED KLDFVQPASF 60 VYSGELVEAL QASSSLGEET NNKSCDLPGS PVKRDSPERS TGEDCDVKAV PCSKRRKTVE 120 KKVVCVPVGP ADGRQKNDGP PSDMWAWRKY GQKPIKGSPY PRGYYRCSFF EDDESRNSGG 180 IDRFNFFSWS GSCGLLGNNA VI |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pgl.15018 | 0.0 | root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Swissprot | Q93WV5 | 9e-20 | WRK69_ARATH; Probable WRKY transcription factor 69 | ||||
TrEMBL | A0A0D6R4G3 | 7e-46 | A0A0D6R4G3_ARACU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 4e-22 | WRKY DNA-binding protein 69 |
Publications ? help Back to Top | |||
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