PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl015792
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family B3
Protein Properties Length: 279aa    MW: 32155.5 Da    PI: 9.4553
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55344543PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.6e-109693799
               EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
               tl  +  ++W v++  ++ +++y + kGW++F +  +Lk+ D+++F+l++++  +++v++frk
  Pgl015792  9 TLLGPAKEKWPVTIPGNNMKQQY-I-KGWQNFSDHYNLKQEDICIFELVNKKLLTFKVHLFRK 69
               7888999*******666666665.4.6**********************9999999***9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086310.503170IPR003340B3 DNA binding domain
SuperFamilySSF1019361.37E-10869IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.4E-10869IPR015300DNA-binding pseudobarrel domain
CDDcd100171.77E-9868No hitNo description
PfamPF023621.4E-7969IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
XSNYEVGFTL LGPAKEKWPV TIPGNNMKQQ YIKGWQNFSD HYNLKQEDIC IFELVNKKLL  60
TFKVHLFRKA DRISSRNKGG ISETEHEISR IKNWSISTKV KSQEIQVRIK TEEEFSPNVP  120
LISPGANHLS LGENHHVEIL KWGQCRLGLL KPACQEAKES SGCRCHGHKK CYSLLKETKD  180
DDFITDGHVY SENKKSSEVM AYNPSVENRT RYVRTKRNKL LNYDRDHMPT LMMDEKPYFL  240
RGERHKRLAM PNAGVSCKSG IQTAALKRDL RCSDAIEPE