PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl015522
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NF-YA
Protein Properties Length: 333aa    MW: 35786.6 Da    PI: 6.5021
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55347288PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA53.86.4e-171712052358
  CBFB_NFYA  23 kleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                k+e e+kl +k rkpylheSRh hA+rR+Rg+gGrF
  Pgl015522 171 KAELENKL-IKVRKPYLHESRHLHAMRRARGCGGRF 205
                7899****.**************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005212.1E-15150208IPR001289Nuclear transcription factor Y subunit A
PfamPF020452.6E-13171205IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115220.706171208IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MTNAGSYNLL TACFVDRSNA LDPSLKEAAA QSQQLQVLAQ LQQSGGGGMN KGMTRMQLSP  60
TKSGYGGTIA NGQHHQPHVT STLLSTSPEY NVPHTQLELG HSIAHAAYPC TDPYIGAIVD  120
AYGDHAMNHS HILGFQQGRM PLPSDVIEMN QSMSMLNNTM EFCDVGNLEX KAELENKLIK  180
VRKPYLHESR HLHAMRRARG CGGRFLNTKL LETTKVNADS GKLTEGQHAW AVSSSSTEAL  240
QSENGNMNSS EVHGNSGLSG SEVTSMSESC PDGTSYSYTQ GNGGYLYHHA SSHFHLLGFS  300
PLSDGSGEVE SGQGMGYGIK WIAAESCCDP MKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6QWS41e-110A0A0D6QWS4_ARACU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.15e-26nuclear factor Y, subunit A9