PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Pgl011491 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | Trihelix | ||||||||||||
Protein Properties | Length: 285aa MW: 32405.6 Da PI: 9.2215 | ||||||||||||
Description | Trihelix family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43 | 1.2e-13 | 18 | 105 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W + v Li+++ e+ +++ g lk ++Wee+ k++ + ++ ++ kqC+ek+++l++ryk +k++++ r s+++ ++++f++l+ Pgl011491 18 EWHPDTVARLIDGYGEKCANIK-GYLKTKDWEEIVKYVnlqcEGSKLPKTMKQCREKIDSLKRRYKLEKRRAEVRGSDHV-NWSFFEKLD 105 599*************999986.55*************999899999**************************9978887.9******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 6.7E-16 | 16 | 107 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
MTSDDDEFRR ANLGSRAEWH PDTVARLIDG YGEKCANIKG YLKTKDWEEI VKYVNLQCEG 60 SKLPKTMKQC REKIDSLKRR YKLEKRRAEV RGSDHVNWSF FEKLDDIMRN LRRSGNVSEG 120 QSFEVAEALD FEGFDGDNRS DLMISKSSDK GKVCIDTSDV LLDDGMNMDS NRLTGSRRVR 180 VELQDKGKKR VHGVSDRISK RICPSPSPSP SPSPNPNLNT NPNPVRALAD ALVSFSEIYS 240 KIESAKMELF AKMNSELAKL HRKKKKNPSC SNIDCADSDR RRPPE |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pgl.24491 | 0.0 | stem| vegetative bud |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6R4F0 | 1e-139 | A0A0D6R4F0_ARACU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 2e-19 | Trihelix family protein |