PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009375
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 468aa    MW: 51356.5 Da    PI: 7.0365
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-36145PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10181221545
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Pgl009375 181 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 221
                788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-7172224No hitNo description
SMARTSM003383.6E-8177248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415179223IPR004827Basic-leucine zipper domain
CDDcd147087.22E-25181233No hitNo description
PfamPF001702.8E-7181221IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6181224No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
PfamPF141442.6E-34265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MANKIDEQVT AAASYVRSVS LGMQSFAPPL VSHTIGTFGT EANKGYFGEL EQTVGFHLDD  60
VASLAGKSSA VNSRPAVNVN HSGTLQIAGL SKVQQPPDFT PPSVNSVESR HHSSHRGGAQ  120
SGGFVSTSGN RIDPWEDSLM ADTSPRTDDT STDVDTDEKM DLVLHGGDSS DRTKDKNGDQ  180
KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLTQLEQE LQRARQQGIF IGGSCVGDQS  240
HSMSGNGALA FDMEYARWLD EHHRQINDLR SAVNSHVGDN ELRGLVEAVM AHYDEIFRLK  300
SVAAKSDVFH LVSGMWKTPA ERCFMWMGGF RPSELLKILV THLEPLTEHQ FMGINNLQHS  360
SQQAEDALSQ GMDALQQSLA ETLASGSLGP PGTSGNVANY MGQMAMAMGK LGTLEGFVHQ  420
ADNLRQQTLQ QMHRILTTRQ AARALLAISD YFSRLRALSS LWLARPRD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.40130.0needle| root| stem| vegetative bud
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006826801.10.0transcription factor TGA2.3
RefseqXP_011621010.10.0transcription factor TGA2.3
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D6QSB10.0A0A0D6QSB1_ARACU; Uncharacterized protein
STRINGERM940380.0(Amborella trichopoda)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-130bZIP family protein