PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl004819
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 317aa    MW: 35608.1 Da    PI: 4.5045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55335131PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-24068PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.7e-1653104155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                s+y+GV +++ +grW+A+I  +     +k+ +lg+f t eeAa a+++a+ +++g
  Pgl004819  53 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFSTQEEAATAYDRAAIEYRG 104
                89****99**********988422...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-1153104IPR001471AP2/ERF domain
CDDcd000184.29E-2653114No hitNo description
SuperFamilySSF541714.58E-1853114IPR016177DNA-binding domain
PROSITE profilePS5103218.25554112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.4E-1954113IPR001471AP2/ERF domain
SMARTSM003808.1E-2854118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
XDLAALKYWG TETILNFPLS TYTKELEEMQ SVSKEEYLAS LRRRSSGFSR GVSKYRGVAR  60
HHHNGRWEAR IGRVLGNKYL YLGTFSTQEE AATAYDRAAI EYRGLNAVTN FDLSRYMSFL  120
RPAKDLINGD GEDVVVSNED SGTSLVPGGV STKSSNDEDN MSSLLQPQLS WTPPQLECSN  180
EEKESSSAAD PTDLDHLFAQ SSSKFKEIME IRTSGHQPGE DLHNIETANF AEDLEMFFNS  240
NNMLGSDAEL SLNVDSPSAM NNMFVQPDHL HLQMPFDMHE ICNGEFLDLD HHQHADLEYP  300
LIDPISSFPN FVVRTCS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.51000.0stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245606.17e-73PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A067KRL42e-71A0A067KRL4_JATCU; Uncharacterized protein
STRINGXP_008223596.12e-71(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.29e-52ERF family protein