PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Pgl003884 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||||||
Protein Properties | Length: 367aa MW: 40651.7 Da PI: 8.4521 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 77 | 120 | 2 | 45 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +++k+ rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Pgl003884 77 PSDKVLRRLAQNREAARKSRLRKKAYVQQLETSRVKLSQLEQEL 120 689****************************9777777666544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.5E-8 | 70 | 122 | No hit | No description |
SMART | SM00338 | 2.8E-8 | 76 | 139 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.048 | 78 | 122 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-8 | 78 | 120 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.71E-7 | 80 | 122 | No hit | No description |
CDD | cd14708 | 2.10E-21 | 80 | 132 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 83 | 98 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-31 | 167 | 241 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence Send to blast |
MDPQSTQYIS SRRTGGGFDS SSTRQLDMWA DSFKADNSPR TGTSSNMEAD AKVDKSEDAH 60 RGTVVVSRSS DQEANKPSDK VLRRLAQNRE AARKSRLRKK AYVQQLETSR VKLSQLEQEL 120 ERARQQGIYI GGTSGDHISS ANGAANAGAA AFDMEYAHWV EEQNRQISDH RAALTAHVTD 180 IELRILVEGG MAHYDSLFRM KSVAAKADVF HLVSGMWKTP AERCFMWMGG FRPSELLKIL 240 KPQLEPLTEQ QVMSVDNLQH SSQQAEDALS QGMEALQQSL AETSAAGSLG ASNVANYMGH 300 MAMAMGKLGM LENFVHQADN LRQQTLQQMS RILTTRQAAR GLLAMEDYFG RLRALSSLWA 360 ARPREPA |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pgl.25165 | 0.0 | needle |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010905948.1 | 1e-180 | transcription factor TGA4 isoform X1 | ||||
Refseq | XP_029117024.1 | 1e-180 | transcription factor TGA4 isoform X1 | ||||
Swissprot | Q41558 | 1e-153 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A3G6J9K5 | 0.0 | A0A3G6J9K5_PINTA; BZIP transcription factor 28 | ||||
STRING | XP_008801018.1 | 1e-178 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-133 | bZIP family protein |