PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||||||
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TF ID | Pgl000557 | ||||||||||||||||
Organism | |||||||||||||||||
Taxonomic ID | |||||||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||||||||||
Protein Properties | Length: 446aa MW: 49023.6 Da PI: 6.3844 | ||||||||||||||||
Description | bZIP family protein | ||||||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.1e-10 | 265 | 323 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ + l++e+ Pgl000557 265 KRAKRILANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTLLQRDSMGLTNEN 323 9********************************************99998887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.3E-18 | 261 | 325 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.932 | 263 | 326 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-10 | 265 | 317 | No hit | No description |
Pfam | PF00170 | 1.1E-8 | 265 | 321 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.98E-11 | 265 | 316 | No hit | No description |
CDD | cd14703 | 7.77E-26 | 266 | 315 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence Send to blast |
MDEHPIPSPR PPVSPFSADS HSRPDASRTG DVLPPRKGGH RRAHSEIPRQ VSWDKVGKGV 60 KKEAEWDRDG DLNMEVGDGE DLFSMYIDLE KLNTLNTTSS ANPADIGEGS GESGRKTLNA 120 DDDNEDDKAG PDDSGGNSVK EKDIDSGDDD AESESNEKKD GHKRSFPGGV DSTGRSHAAA 180 SHHHPHHVRS VSMDSVLSSF QNSENPNQKP APSPTGRNIK HFHSNSMDGS INFKLKFGNG 240 EFSGPELNKI MSNEKLAEIA MTDPKRAKRI LANRQSAARS KERKMRYISE LERKVQTLQT 300 EATTLSAQLT LLQRDSMGLT NENNELKLRL QAMDQQAQLR DALNEALSEE VQRLKLATGQ 360 SISINSHLFQ LQQQGPHVAV HQLQQQQQHQ QQHQQQVTNS QQSPGHQTNQ NEVLQNTYGA 420 FPGSLGSFLK SDGSNIPASQ GSNCSF |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pgl.8697 | 0.0 | root |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006852991.1 | 1e-104 | probable transcription factor PosF21 isoform X1 | ||||
Refseq | XP_011626470.1 | 1e-104 | probable transcription factor PosF21 isoform X2 | ||||
TrEMBL | B8LQ18 | 0.0 | B8LQ18_PICSI; Uncharacterized protein | ||||
STRING | ERN14458 | 1e-104 | (Amborella trichopoda) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 6e-66 | bZIP family protein |