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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG033539.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GRAS |
Protein Properties |
Length: 500aa MW: 55187.1 Da PI: 6.0259 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG033539.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 332.1 | 1e-101 | 109 | 493 | 1 | 374 |
GRAS 1 lvelLlecAeavss..gdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal...ppsetsekn......sseelaalklfse 86
lv+lL+++Aea+++ ++ la+ +L rl+el+sp++ ++m+Rlaayft AL+ l +++ + + p + ++++ + ++laa++l+++
CCG033539.1 109 LVHLLIAAAEALTDlnKNSDLARVILVRLKELVSPNDgTNMERLAAYFTDALQGLLEGTGGKHHSVTnngPYHHHHRDDpqqhhhQNDALAAFQLLQD 206
68***********9556667************8887669*****************9955443333311133333333366777899999******** PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
+sP++kf+h+taNqaIleav+ ++++Hi+D+di++G+QW++L+qaL sR++gpp +lRiT++++ s+ s +++etg+rL fA+++g pf+f+
CCG033539.1 207 MSPYVKFGHFTANQAILEAVADDRKIHIVDYDIMEGIQWASLMQALVSRKDGPPtpHLRITAMSRGGSNrrSIGTVQETGRRLVAFAASIGQPFSFHQ 304
**************************************************776556********9777788999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpr 277
++ e++++++L++ +gE l+ n++l+l ++ + ++ ++L+ k+l+P+++++ve+e+ +++ F+ rf+++l++ysa++ds+ea++p
CCG033539.1 305 CRLDSDETFRPSALKLVKGEPLVMNCMLHLPHFSYRAPDSV---ASFLSGAKTLNPRLITMVEEEVGPiGDGGFVGRFMDSLHHYSAFYDSMEAGFPM 399
9999****************************985555555...59*******************9988***************************** PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+ ++r+ vEr++lg++i +a ++ r e++ W e+l + GF+pv++s + +qaklll ++ dgyrvee s+ lvlgWk+r+L+s+S W+
CCG033539.1 400 QGRARALVERVILGPRIAGSLARIYRA---RGEEVCPWGEWLAAGGFQPVKVSFANHCQAKLLLGVFN-DGYRVEELaSNRLVLGWKSRRLLSASIWT 493
**************************9...888889********************************.******876999****************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MAMAIDGTQF ELDFSGYSST TTTATTISTE NDHGHGCNWN DWSPMVDWEA LSGPHDDFQG 60 LIDSMMDDGA LMNQSSRLTP DTSNSMSTSD TVFVDEETSC SNDFKGLRLV HLLIAAAEAL 120 TDLNKNSDLA RVILVRLKEL VSPNDGTNME RLAAYFTDAL QGLLEGTGGK HHSVTNNGPY 180 HHHHRDDPQQ HHHQNDALAA FQLLQDMSPY VKFGHFTANQ AILEAVADDR KIHIVDYDIM 240 EGIQWASLMQ ALVSRKDGPP TPHLRITAMS RGGSNRRSIG TVQETGRRLV AFAASIGQPF 300 SFHQCRLDSD ETFRPSALKL VKGEPLVMNC MLHLPHFSYR APDSVASFLS GAKTLNPRLI 360 TMVEEEVGPI GDGGFVGRFM DSLHHYSAFY DSMEAGFPMQ GRARALVERV ILGPRIAGSL 420 ARIYRARGEE VCPWGEWLAA GGFQPVKVSF ANHCQAKLLL GVFNDGYRVE ELASNRLVLG 480 WKSRRLLSAS IWTSPSDPDL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |