PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG032726.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family GRAS
Protein Properties Length: 649aa    MW: 74058.5 Da    PI: 6.7616
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG032726.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS364.91.1e-1112756453374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L+ cAea   gd++ a+a L+++++++sp gd++qRla+yf+++L++rla+++  l+   p +++s ++ ++ l+a+kl++ ++P+ k+++l aN+
  CCG032726.1 275 TQLILCAEAAGRGDQKTASAKLKQIRQHSSPFGDANQRLAHYFANGLEERLAGTGMLLS--GPITQNS-TTAVDILNAYKLYVTICPFRKMTNLCANR 369
                  689**************************************************444444..4444443.569************************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  +I + + +++ vHiiDf+is+G+QWp+++   + Rp+gpp++RiTg++ p++g   +e++eetg+rL+++A++++vpfe+n+ +a+++e++++e+L++
  CCG032726.1 370 TIARVAVKATSVHIIDFGISYGFQWPCFIYRHSLRPGGPPKIRITGIELPQPGfrPAERVEETGRRLQRLADRMKVPFEYNA-IAQKWETIQYEDLKI 466
                  ****************************************************9*****************************.7************** PP

         GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  ++  +E+++Vn++++ ++l+d++++ +s+rd+vLkl+k+++P+v+ +  ++ ++n++ F++rf eal +ysa fd+lea++pre++er   Ere++gr
  CCG032726.1 467 DRdrDEVIVVNCMYRFKNLPDDTMAYNSPRDAVLKLIKTINPDVFLHGVRNGSYNAPFFVTRFREALFHYSAYFDMLEANAPREDQERLLFEREMIGR 564
                  9999********************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++ nvvaceg++r+er et+++W++r  + GF+++pl +++ + +k++   +++d + v+e+ ++++lgWk++   ++SaW+
  CCG032726.1 565 DAINVVACEGTRRIERPETYKQWQMRNLRNGFRQIPLHQSIINRVKSIKPDYHKD-FIVDEDGQWVLLGWKGKIFHAISAWK 645
                  *****************************************************77.*************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098560.863247626IPR005202Transcription factor GRAS
PfamPF035143.8E-109275645IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    Send to blast
MEPPSFPNIL QAPTLGSSSD EDTAYNNDTN DFSHAVFKYI NDILMEDDLG DKTCMLQDCL  60
ALQAAEKSLY DVLGEEHPPS SDHRAPCLAQ INESPDENYT PTTSVQSSVL QSFYSPESAF  120
VVPYVHAETH SFGQLNGVTG SANKLLPYSH SVKFSSMRKA SDLPQPEEEE VADRIQKNGK  180
NYSSKQTRGN YQCDRNDYLE EGRSKKQPSV SESTHLELLD DDFLHSIESG VHISCPLYDN  240
SRSAAYNKFL HNEQLTASHM RMRTLANKRE TDLWTQLILC AEAAGRGDQK TASAKLKQIR  300
QHSSPFGDAN QRLAHYFANG LEERLAGTGM LLSGPITQNS TTAVDILNAY KLYVTICPFR  360
KMTNLCANRT IARVAVKATS VHIIDFGISY GFQWPCFIYR HSLRPGGPPK IRITGIELPQ  420
PGFRPAERVE ETGRRLQRLA DRMKVPFEYN AIAQKWETIQ YEDLKIDRDR DEVIVVNCMY  480
RFKNLPDDTM AYNSPRDAVL KLIKTINPDV FLHGVRNGSY NAPFFVTRFR EALFHYSAYF  540
DMLEANAPRE DQERLLFERE MIGRDAINVV ACEGTRRIER PETYKQWQMR NLRNGFRQIP  600
LHQSIINRVK SIKPDYHKDF IVDEDGQWVL LGWKGKIFHA ISAWKPVQE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A5e-452776458375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011042724.10.0PREDICTED: scarecrow-like protein 14
TrEMBLB9HPF50.0B9HPF5_POPTR; Uncharacterized protein
STRINGPOPTR_0009s03830.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-170GRAS family protein