PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG031137.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 319aa    MW: 36302.8 Da    PI: 8.1482
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG031137.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-112757434
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34
                 l+++rr+++NReAAr+sR+RKka++++Le  
  CCG031137.1 27 LEVQRRLAQNREAARKSRLRKKAYVQQLESS 57
                 689*************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.00472484IPR004827Basic-leucine zipper domain
PfamPF001702.9E-82956IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.0E-83060No hitNo description
SuperFamilySSF579593.13E-73069No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
PfamPF141443.2E-26114188IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MTTKKLTLRV LSAKYEYLLR DYTCECLEVQ RRLAQNREAA RKSRLRKKAY VQQLESSRVM  60
LIQLEQELDR ARQQGLYMGG GVDASQLGFG GPTNPGIATF EMEYGHWLEE QNRHICDMRT  120
ALNAHISDVE LHMLVESDMS LYSELFRLKA TATKADVFYV MSGLWKSSAE RFFLWVGGFR  180
PSQLLEILLP CMNPLTEQQL VHVYNLQQSC HHAEDALSQG LEKVQRHVAE TVAAGQLGEA  240
SCSPHLETAM EKLELLARFV QQADHIRQET LQQMSRILTT RQAARGLLAL GEYFQRLRAL  300
SSLWATRPRG LLAHVGLPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011025627.10.0PREDICTED: transcription factor TGA1-like
SwissprotQ392371e-147TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A3S9LK530.0A0A3S9LK53_POPTO; TGA-type basic leucine zipper protein TGA1.1
STRINGPOPTR_0007s06180.11e-180(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.61e-150bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]