PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG031136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 295aa MW: 33624.4 Da PI: 7.1979 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.7 | 9.4e-12 | 7 | 39 | 1 | 33 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 e+++ ++rr+++NReAAr+sR+RKka++++Le CCG031136.1 7 EAKIDVQRRLAQNREAARKSRLRKKAYVQQLES 39 677889*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0026 | 7 | 67 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-9 | 9 | 39 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.88E-7 | 13 | 46 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.8E-8 | 13 | 43 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 14 | 29 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.4E-26 | 97 | 172 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MFLAWMEAKI DVQRRLAQNR EAARKSRLRK KAYVQQLESS RVMLIQLEQE VDRARQQGLY 60 MGGGADASQL GFGGPTNSGI ATFEMEYGHW LEEQNRHICD MRTALNAHIS DVELHMLVES 120 DMSLYSKLFR LKATATKADV FYVMSGLWKS SAERFFLWVG GFRPSQLLEI LVPCMDPLTE 180 QQLVHVYNLQ QSCQQAEDAF SQGLEKVQQS VAETVAAGQL GEASYSPHME TAMEKFELLA 240 RFVQQADHLR QETLQQMSRI LTTRQAARGL LALGEYFQRL RALSSLWATR PREPA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011025628.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Refseq | XP_011025630.1 | 0.0 | PREDICTED: transcription factor TGA1-like | ||||
Swissprot | Q39237 | 1e-149 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A3S9LK53 | 0.0 | A0A3S9LK53_POPTO; TGA-type basic leucine zipper protein TGA1.1 | ||||
STRING | POPTR_0007s06180.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1096 | 34 | 104 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.6 | 1e-153 | bZIP family protein |