PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG029837.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ZF-HD
Protein Properties Length: 130aa    MW: 14227.9 Da    PI: 8.0444
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG029837.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.92.1e-3261117360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  +v+Y eClkNhA+s+Gg+avDGC+Efm++ geegta al+CaACgCHRn+HRreve+e
  CCG029837.1  61 NVKYGECLKNHAVSVGGYAVDGCREFMAN-GEEGTAGALTCAACGCHRNYHRREVETE 117
                  799*************************8.999*********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257743.0E-1857127IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.8E-3061114IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.1E-2563114IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.36264113IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MPASNYRPVF QLESSSLVYQ GFERGKGSVE LGSSMMRKRQ VVVRRMEEPS RSSTTSFTIR  60
NVKYGECLKN HAVSVGGYAV DGCREFMANG EEGTAGALTC AACGCHRNYH RREVETEVVC  120
DCSSPSSNGN
Functional Description ? help Back to Top
Source Description
UniProtInhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011010640.17e-92PREDICTED: mini zinc finger protein 2-like
SwissprotQ9LJW51e-41MIF2_ARATH; Mini zinc finger protein 2
TrEMBLB9H0F74e-83B9H0F7_POPTR; ZF-HD family protein
STRINGPOPTR_0004s12510.16e-84(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF155034100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.13e-27mini zinc finger 2
Publications ? help Back to Top
  1. Bollier N, et al.
    At-MINI ZINC FINGER2 and Sl-INHIBITOR OF MERISTEM ACTIVITY, a Conserved Missing Link in the Regulation of Floral Meristem Termination in Arabidopsis and Tomato.
    Plant Cell, 2018. 30(1): p. 83-100
    [PMID:29298836]