PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG026693.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 333aa    MW: 35627.6 Da    PI: 8.2031
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG026693.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.42.7e-6621481149
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sasasp+ss+    
  CCG026693.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDITGGSASASPCSSYR--- 96 
                  5899******************************************************************************************9... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                       +sp++sy++sp+sssfpsp+s+  + + +       +sl+p+l++ls+ sss
  CCG026693.1  97 -----QSPCASYNPSPASSSFPSPVSSRYAANGNGnvdadaNSLIPWLRNLSSGSSS 148
                  .....9******************998877665557889999*********997776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.4E-673143IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPVERM DITGGSASAS PCSSYRQSPC ASYNPSPASS SFPSPVSSRY  120
AANGNGNVDA DANSLIPWLR NLSSGSSSAS PKHPNHLFIH TGSISAPVTP PLSSPTARTP  180
RTRNDWDDPA AGQSWMGQNY SCLPSSMPSS TPPSPGRQVL PDSGWLAGIQ IPQSGPSSPT  240
FSLVSRNPFG FKEEALSGAG SRMWTPGQSG TCSPAVPAGI DQTADVPMSD SMAAEFAFGS  300
NAAGLVKPWE GERIHEECVS DDLELTLGNP STR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8235970.0EU823597.1 Populus tremula isolate swl195-14 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236030.0EU823603.1 Populus tremula isolate swl195-31 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236050.0EU823605.1 Populus tremula isolate swl195-43 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236060.0EU823606.1 Populus tremula isolate swl195-54 brassinosteroid signaling positive regulator-related protein gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011039378.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-137BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2K1YGT60.0A0A2K1YGT6_POPTR; Uncharacterized protein
STRINGPOPTR_0004s06100.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-114BES1/BZR1 homolog 4