PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG025977.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

Dof

Protein Properties

Length: 319aa MW: 34386.9 Da PI: 8.0925

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG025977.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	3.9e-39	32	92	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+s+ntkfCyynnysl+qPr+fCk+CrryWtkGGalr vP+Ggg+rknkk + CCG025977.1 32 QEQALKCPRCESSNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRSVPIGGGCRKNKKIK 92 5799******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-25	33	86	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.8E-33	34	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.106	36	90	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MVPPDNLLEK QTSKDDNQSS SSSRKTATTR PQEQALKCPR CESSNTKFCY YNNYSLTQPR 60 HFCKTCRRYW TKGGALRSVP IGGGCRKNKK IKSSSRLSSD SKDSSGSSEI AGFSFFHGLS 120 PAIDFNLATS AAAAAVTSPS FTLDPSASST GSCSLMGFNY PLNSVASGFC GAIQENIGGA 180 SMNINTNLPS SIESLSCINQ DLHWKLQQQR LAMLFGTGEN HKDGNTVSTD HIENLQVQKP 240 QPIMFENLEI SKPQVCAAGN SRKEGAASGD TATEWFFGNS YSQVTATPTN TSNNGNNDNT 300 GNWNGVQAWG DLHQYSALP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011009222.1	0.0	PREDICTED: dof zinc finger protein DOF5.7-like isoform X2
TrEMBL	A0A2K1ZPY2	0.0	A0A2K1ZPY2_POPTR; Uncharacterized protein
STRING	POPTR_0005s19310.1	1e-153	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3854	34	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	5e-57	Dof family protein