PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG023292.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 328aa    MW: 35229.3 Da    PI: 8.3237
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG023292.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.33e-6621451150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGtt+rkg+kp e++++ g sa++sp+ss++   
  CCG023292.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTFRKGCKPVERMDILGVSATTSPCSSYH--- 96 
                  5899*******************************************************************************************... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                       +sp++sy++sp sssfpsp+s++ + +a+   +sl+p+l++ls++sss+
  CCG023292.1  97 -----PSPCASYNPSPGSSSFPSPASSSYAANANMdcNSLIPWLKNLSSASSSA 145
                  .....******************99888776665567**********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.8E-663139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTF RKGCKPVERM DILGVSATTS PCSSYHPSPC ASYNPSPGSS SFPSPASSSY  120
AANANMDCNS LIPWLKNLSS ASSSASSSKF PHLYIHGGSI SAPVTPPLSS PTARTAGIKA  180
DWEDQSIRPG WGGQHYSFLP SSTPPSPGRQ IVPDPEWFRG IRMPQGGPTS PTFSLVASNP  240
FGFKEEALAG GGSNGGSRMW TPGQSGTCSP AIAAGSDHTA DIPMAEISDE FAFRCNATGL  300
VKPWEGERIH EECGSDDLEL TLGNSRTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1454330.0EF145433.1 Populus trichocarpa clone WS01124_K11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011002762.10.0PREDICTED: BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_011002763.10.0PREDICTED: BES1/BZR1 homolog protein 4 isoform X2
SwissprotQ9ZV881e-139BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2K2CAH80.0A0A2K2CAH8_POPTR; Uncharacterized protein
STRINGPOPTR_0001s39520.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-123BES1/BZR1 homolog 4